Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mltA-2Equals llo2201; similar to membrane-bound lytic murein transglycosylase A. (457 aa)    
Predicted Functional Partners:
LLO_1267
Putative coiled-coil protein; Equals llo1267.
  
     0.705
LLO_0191
Hypothetical protein of unknown function; Equals llo0191.
  
     0.697
LLO_0627
Putative integral membrane protein; Equals llo0627.
  
     0.687
iraA
Small-molecule methyltransferase IraA; Equals llo2074.
  
     0.661
LLO_2200
Hypothetical protein, eukaryotic tubulin-tyrosine ligase (TTL) domain; Equals llo2200.
 
     0.661
LLO_3144
Hypothetical protein; Equals llo3144.
  
     0.625
LLO_1394
Hypothetical protein; Equals llo1394.
  
     0.620
LLO_0146
Hypothetical protein; Equals llo0146.
  
     0.610
LLO_0405
Hypothetical protein; Equals llo0405.
  
     0.602
LLO_2221
Putative subtilisin-like serine protease; Equals llo2221.
  
     0.602
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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