Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLO_2467Putative sulfate permease with a cNMP binding motif; Equals llo2467. (731 aa)    
Predicted Functional Partners:
LLO_0032
Putative transposase (central part); Equals llo0031.
   
   0.832
LLO_2668
Hypothetical protein; Equals llo2667.
  
 0.825
LLO_0722
Putative polyketide synthase of type I; Equals llo0722.
  
 0.755
LLO_3304
Putative guanylate/adenylate cyclase; Equals llo3304.
 
 
 0.664
LLO_3343
Ankyrin repeat protein; Equals llo3343.
   
 0.664
LLO_2196
Equals llo2196; similar to adenylate cyclase.
 
 
 0.630
LLO_3442
Putative sensory box histidine kinase/response regulator; Equals llo3442.
 
 
 0.624
LLO_2490
Putative sensory histidine-kinase / response regulator; Equals llo2490.
 
 
 0.614
LLO_1197
Putative adenylate/guanylate cyclase; Equals llo1197.
 
 
 0.582
LLO_0941
Hypothetical protein; Equals llo0941.
  
 
  0.559
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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