Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LLO_2829Putative 2OG-Fe(II) oxygenase superfamily protein; Equals llo2829. (202 aa)    
Predicted Functional Partners:
LLO_2830
Putative zinc metalloprotease; Equals llo2830.
       0.817
tufA-2
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.632
tufA
Elongation factor Tu; Equals llo0484.
   
   0.632
LLO_2831
Hypothetical protein; Equals llo2831.
       0.559
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
   
 0.539
yadH
Putative transporter subunit: membrane component of ABC superfamily; Equals llo2821; Highly similar to ABC-type multidrug transport system, permease component.
       0.454
yadG
Equals llo2822; Highly similar to ATP-binding component of ABC transporter.
       0.454
LLO_1249
Equals llo1249; similar to conserved hypothetical protein.
 
     0.447
LLO_2828
Hypothetical protein; Equals llo2828.
       0.440
LLO_2832
Hypothetical protein; Equals llo2832.
       0.430
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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