STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLO_3003Putative oxidoreductase, short-chain dehydrogenase/reductase family protein; Equals llo3003. (248 aa)    
Predicted Functional Partners:
LLO_0603
Equals llo0603; similar to O-methyltransferase.
 
  
   0.731
LLO_2728
Equals llo2728; similar to oxidoreductase.
  
     0.671
LLO_2965
Putative acetyltransferase; Equals llo2965.
  
 
 0.559
LLO_2605
Equals llo2605; similar to acyl-CoA synthetase.
  
 
 0.485
LLO_0976
Putative non-ribosomal peptide synthase; Equals llo0976.
  
 
 0.447
rkpA
Putative type I polyketide synthase WcbR; Equals llo3179.
  
 
 0.440
LLO_0722
Putative polyketide synthase of type I; Equals llo0722.
  
 
 0.431
LLO_3004
Hypothetical protein; Equals llo3004.
       0.431
fabD
Malonyl CoA-acyl carrier protein transacylase (MCT); Equals llo1313.
  
 
 0.423
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.