Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLO_3045Hypothetical protein; Equals llo3045. (236 aa)    
Predicted Functional Partners:
LLO_2124
Equals llo2124; similar to RND efflux membrane fusion proteins.
  
     0.635
LLO_0804
Equals llo0804; similar to inorganic transporter and to carbonic anhydrase (bi-functional).
 
     0.624
LLO_2123
Putative outer membrane component of multidrug efflux pump; Equals llo2123.
  
     0.559
LLO_2125
Putative toxin secretion ABC transporter ATP-binding protein; Equals llo2125.
  
     0.552
LLO_2077
Equals llo2077; Putative membrane protein.
  
     0.492
yaeT
Outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.418
bamD
Putative competence lipoprotein comL precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
    
 
 0.415
mip
Macrophage infectivity potentiator; Equals llo2064.
    
 
 0.400
Your Current Organism:
Legionella longbeachae
NCBI taxonomy Id: 661367
Other names: L. longbeachae NSW150, Legionella longbeachae NSW150, Legionella longbeachae str. NSW150, Legionella longbeachae strain NSW150
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