STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO05149.1Hydrogenase maturation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)    
Predicted Functional Partners:
KUO03189.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
KUO03211.1
Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
AQJ67_09350
Carrier domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
KUN95669.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
KUO05642.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
KUO05624.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.973
KUN97495.1
rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.973
KUN92236.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.973
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 
 0.950
KUO03038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.944
Your Current Organism:
Streptomyces caeruleatus
NCBI taxonomy Id: 661399
Other names: CCTCC M 208213, NRRL B-24802, S. caeruleatus, Streptomyces caeruleatus Zhu et al. 2011, Streptomyces sp. GIMN4.002, strain GIMN4.002
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