STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO04821.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
AQJ67_09350
Carrier domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.813
KUO03211.1
Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.748
KUO03037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.746
KUO05624.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.745
KUO05642.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.744
KUN95669.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.741
KUO02981.1
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
     
 0.712
KUO04820.1
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
KUO04819.1
MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.681
Your Current Organism:
Streptomyces caeruleatus
NCBI taxonomy Id: 661399
Other names: CCTCC M 208213, NRRL B-24802, S. caeruleatus, Streptomyces caeruleatus Zhu et al. 2011, Streptomyces sp. GIMN4.002, strain GIMN4.002
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