STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83403.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
AIE87749.1
TPR repeat-containing protein.
 
 
 0.823
AIE86487.1
Tpr domain protein.
 
 
   0.753
AIE83486.1
TPR repeat-containing protein.
 
     0.736
AIE85730.1
TPR repeat-containing protein.
 
 
 0.732
AIE85809.1
TPR repeat-containing protein.
 
   
 0.718
AIE87900.1
Putative tetratricopeptide repeat-containing domain protein.
 
   
 0.701
AIE87764.1
TPR repeat-containing protein.
 
 
 0.671
AIE87765.1
Tetratricopeptide repeat-containing protein.
 
 
 0.664
AIE83699.1
TPR repeat-containing protein.
 
     0.622
AIE83404.1
Hypothetical protein.
       0.556
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.