node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE83835.1 | rph | OP10G_0467 | OP10G_0189 | HAM1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.957 |
AIE84289.1 | AIE84632.1 | OP10G_0921 | OP10G_1264 | RNA 3'-phosphate cyclase. | SSU ribosomal protein S1p. | 0.705 |
AIE84289.1 | rph | OP10G_0921 | OP10G_0189 | RNA 3'-phosphate cyclase. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.732 |
AIE84289.1 | rpsD | OP10G_0921 | OP10G_4143 | RNA 3'-phosphate cyclase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.898 |
AIE84289.1 | rpsE | OP10G_0921 | OP10G_0597 | RNA 3'-phosphate cyclase. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.708 |
AIE84289.1 | rpsK | OP10G_0921 | OP10G_0607 | RNA 3'-phosphate cyclase. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.879 |
AIE84632.1 | AIE84289.1 | OP10G_1264 | OP10G_0921 | SSU ribosomal protein S1p. | RNA 3'-phosphate cyclase. | 0.705 |
AIE84632.1 | AIE85332.1 | OP10G_1264 | OP10G_1964 | SSU ribosomal protein S1p. | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | 0.799 |
AIE84632.1 | AIE87170.1 | OP10G_1264 | OP10G_3802 | SSU ribosomal protein S1p. | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 0.799 |
AIE84632.1 | rph | OP10G_1264 | OP10G_0189 | SSU ribosomal protein S1p. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.846 |
AIE84632.1 | rpsD | OP10G_1264 | OP10G_4143 | SSU ribosomal protein S1p. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
AIE84632.1 | rpsE | OP10G_1264 | OP10G_0597 | SSU ribosomal protein S1p. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.994 |
AIE84632.1 | rpsK | OP10G_1264 | OP10G_0607 | SSU ribosomal protein S1p. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.997 |
AIE84632.1 | rtcA | OP10G_1264 | OP10G_4089 | SSU ribosomal protein S1p. | RNA 3'-terminal-phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. | 0.705 |
AIE85034.1 | rph | OP10G_1666 | OP10G_0189 | DnaB domain protein helicase. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.572 |
AIE85332.1 | AIE84632.1 | OP10G_1964 | OP10G_1264 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | SSU ribosomal protein S1p. | 0.799 |
AIE85332.1 | rph | OP10G_1964 | OP10G_0189 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.609 |
AIE85332.1 | rpsD | OP10G_1964 | OP10G_4143 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.824 |
AIE85332.1 | rpsE | OP10G_1964 | OP10G_0597 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.796 |
AIE85332.1 | rpsK | OP10G_1964 | OP10G_0607 | DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.780 |