STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83611.1Peptidase M48, Ste24p. (242 aa)    
Predicted Functional Partners:
AIE83793.1
Outer membrane efflux protein.
  
     0.594
AIE83612.1
Aminotransferase class I and II.
       0.558
AIE83613.1
Hypothetical protein.
       0.543
AIE83610.1
Hypothetical protein.
       0.532
AIE84410.1
Outer membrane efflux protein.
  
     0.525
AIE86553.1
Outer membrane efflux protein.
  
     0.516
AIE85175.1
Surface antigen (D15).
  
   
 0.502
AIE84137.1
Outer membrane efflux protein.
  
     0.482
AIE86462.1
Biopolymer transport protein ExbD/TolR.
 
     0.453
AIE87574.1
General secretion pathway protein D.
 
     0.450
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.