STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83631.1Sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)    
Predicted Functional Partners:
AIE83630.1
Sugar ABC transporter ATP-binding protein.
 
 0.995
AIE83632.1
Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family.
 
0.993
AIE87642.1
ABC transporter-like protein.
 
 0.983
AIE87640.1
Sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.969
AIE87034.1
Basic membrane lipoprotein.
 
 
 0.965
AIE87652.1
Putative lipoprotein.
 
 
 0.965
AIE87641.1
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.922
AIE83629.1
Putative oxidoreductase protein.
       0.773
AIE86088.1
ABC transporter-like protein.
     0.679
rbsA
ABC transporter related-protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
     0.673
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.