STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83744.1Putative thioredoxin. (425 aa)    
Predicted Functional Partners:
AIE88147.1
Cytochrome c-like DipZ protein, thioredoxin.
 
 0.872
AIE83745.1
Hypothetical protein.
       0.757
AIE83463.1
Thiol-disulfide isomerase-like thioredoxin.
  
     0.747
AIE87529.1
Thiol-disulfide isomerase-like thioredoxin.
  
     0.562
AIE83746.1
XRE family transcriptional regulator.
       0.541
AIE87195.1
Ribonucleotide-diphosphate reductase subunit alpha.
 
 
 0.537
AIE87313.1
Cytochrome c heme lyase subunit CcmF.
 
  
 0.458
AIE83743.1
Glycoside hydrolase clan GH-D.
       0.451
AIE88098.1
Cytochrome c biogenesis protein transmembrane region.
 
 
 0.445
AIE85878.1
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE.
 
  
 0.439
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (28%) [HD]