STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83772.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
AIE85986.1
General secretion pathway protein K.
 
 
 0.817
AIE87570.1
General secretion pathway protein K.
 
 
 0.810
AIE83771.1
UDP-glucose 4-epimerase.
       0.732
AIE85769.1
Hypothetical protein.
  
     0.707
AIE86757.1
Hypothetical protein.
  
     0.671
AIE83735.1
Hypothetical protein.
  
     0.669
AIE83605.1
Hypothetical protein.
  
     0.654
AIE84070.1
Hypothetical protein.
 
    0.639
AIE86710.1
Glycosyl transferase family 39.
  
     0.629
AIE84451.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.