STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE83914.1Iron-sulfur cluster assembly ATPase protein SufC. (252 aa)    
Predicted Functional Partners:
AIE83915.1
Iron-sulfur cluster assembly protein SufD.
 
 0.998
AIE85752.1
Iron-sulfur cluster assembly protein SufB.
 
 0.997
AIE83918.1
Cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.996
AIE83919.1
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
  
  
 0.946
AIE84202.1
Cysteine desulfurase.
  
 0.902
AIE83921.1
FeS assembly SUF system protein.
 
  
 0.894
AIE87365.1
Isopenicillin N epimerase.
 
  
 0.768
AIE83917.1
Phosphoryl Seryl-TRNA(Ser/Sec) Kinase.
       0.679
AIE83916.1
Hypothetical protein.
       0.677
AIE83923.1
Putative iron binding protein from the HesB_IscA_SufA family; Belongs to the HesB/IscA family.
  
 
 0.652
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.