STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84156.1Transcriptional regulator, LacI family. (315 aa)    
Predicted Functional Partners:
AIE84520.1
Periplasmic binding protein/LacI transcriptional regulator.
  
   
 0.776
AIE86515.1
Transcriptional regulator, LacI family.
  
     0.775
AIE83696.1
Transcriptional regulator.
  
     0.774
AIE83727.1
Putative HTH-type transcriptional regulator DegA.
  
     0.772
AIE84720.1
GntR family transcriptional regulator with LacI sensor.
  
     0.767
AIE83738.1
GntR family transcriptional regulator.
  
     0.759
AIE86161.1
Transcriptional regulator, GntR family with LacI sensor.
  
     0.727
AIE86400.1
Glutamate synthase.
    
 
 0.434
AIE86784.1
Xylose operon regulatory protein.
  
    0.403
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.