STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84297.1Sulfate-transporting ATPase. (274 aa)    
Predicted Functional Partners:
AIE84298.1
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
 
  
 0.956
AIE84299.1
Outer membrane lipoprotein omp16 precursor.
 
  
 0.937
AIE87532.1
Macrolide export ATP-binding/permease protein MacB.
 
      0.893
AIE85399.1
Macrolide export ATP-binding/permease protein MacB.
 
      0.796
AIE85533.1
ABC transporter-related protein.
 
     0.673
AIE83583.1
ABC transporter, ATP-binding protein.
  
     0.652
AIE84337.1
ABC-type probable sulfate transporter, permease protein.
 
  
 0.639
AIE84339.1
ABC-type probable sulfate transporter, periplasmic binding protein.
  
  
 0.596
AIE87763.1
Cell division protein FtsH.
 
    0.590
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.566
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.