STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84354.1Putative family S53 non-peptidase. (553 aa)    
Predicted Functional Partners:
AIE84355.1
Hypothetical protein.
       0.757
AIE87375.1
Hypothetical protein.
  
     0.703
AIE84353.1
Hypothetical protein; Belongs to the glycosyl hydrolase 26 family.
       0.618
AIE84865.1
Hypothetical protein; Belongs to the UPF0145 family.
  
     0.617
AIE86702.1
Hypothetical protein.
  
     0.582
AIE87378.1
40-residue YVTN family beta-propeller repeat protein.
  
     0.562
AIE83778.1
Chloride channel protein.
  
     0.554
AIE84813.1
Hypothetical protein.
  
     0.479
AIE87385.1
40-residue YVTN family beta-propeller repeat protein.
  
     0.441
AIE85270.1
Acetyltransferase.
  
     0.428
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.