STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84530.1Regulatory sensor-transducer, BlaR1/MecR1 family. (819 aa)    
Predicted Functional Partners:
AIE84529.1
Transcriptional repressor, CopY family.
 
  
 0.953
AIE84316.1
Transcriptional repressor, CopY family.
 
  
 0.803
AIE85389.1
Transcriptional repressor, CopY family.
 
  
 0.802
AIE84803.1
Transcriptional repressor, CopY family.
 
  
 0.795
AIE86611.1
Putative transcriptional regulator.
 
  
 0.788
AIE87319.1
Transcriptional regulator.
 
  
 0.782
AIE84345.1
Peptidase M56 BlaR1.
  
     0.770
AIE86929.1
Methicillin resistance protein.
 
  
 0.749
AIE88000.1
S41 family peptidase.
  
     0.546
AIE84528.1
Short-chain dehydrogenase/reductase SDR.
       0.489
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.