STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84648.1YtfT; Belongs to the binding-protein-dependent transport system permease family. (330 aa)    
Predicted Functional Partners:
AIE84650.1
Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor.
 0.998
AIE84649.1
ABC transporter-related protein.
 0.992
AIE84647.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.979
AIE87849.1
D-ribose-binding periplasmic protein.
 
 0.921
AIE86090.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.885
AIE85633.1
Periplasmic ribose-binding protein.
 
 0.873
AIE84666.1
Sugar ABC transporter ATP-binding protein.
 
 0.794
AIE85433.1
Putative L-rhamnose ABC transporter, ATP-binding component.
 
 0.777
rbsA
ABC transporter related-protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.766
AIE86088.1
ABC transporter-like protein.
 
 0.757
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.