STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84664.1NHL repeat-containing protein. (345 aa)    
Predicted Functional Partners:
AIE88147.1
Cytochrome c-like DipZ protein, thioredoxin.
  
    0.566
AIE84663.1
PilT domain-containing protein.
       0.554
AIE84665.1
Ribose ABC superfamily ATP binding cassette transporter, binding protein.
  
    0.504
AIE87906.1
Putative Ig.
  
     0.503
AIE86314.1
Putative lipoprotein.
 
   
 0.456
AIE85194.1
Putative lipoprotein.
 
   
 0.450
AIE88004.1
Hypothetical protein.
 
     0.435
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.