STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84789.1Two-component system, regulatory protein. (188 aa)    
Predicted Functional Partners:
AIE86852.1
Signal transduction histidine kinase.
 
   
 0.846
AIE84632.1
SSU ribosomal protein S1p.
  
    0.500
AIE86220.1
Sensor histidine kinase.
  
  
 0.478
AIE84113.1
Extracellular ligand-binding receptor.
  
 
 0.477
AIE85363.1
Extracellular ligand-binding receptor.
  
 
 0.477
AIE86834.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
 
 0.477
AIE87583.1
Extracellular ligand-binding receptor.
  
 
 0.477
AIE87649.1
Extracellular ligand-binding receptor.
  
 
 0.477
AIE83814.1
Putative two somponent system sensor kinase protein.
  
     0.456
AIE84788.1
N-Acetyl-D-glucosamine ABC transport system, permease protein 2.
  
    0.445
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.