STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE84821.1ThuR, regulatory protein for trehalosemaltose transport system. (359 aa)    
Predicted Functional Partners:
AIE85813.1
Regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator.
  
   
 0.775
AIE83762.1
Transcriptional regulator.
  
     0.774
AIE84456.1
Putative LacI-family transcriptional regulator.
  
     0.774
AIE87936.1
Transcriptional regulator, LacI family.
  
     0.774
AIE83411.1
Transcriptional regulator, LacI family.
  
     0.773
AIE83696.1
Transcriptional regulator.
  
     0.773
AIE84740.1
LacI-family protein transcriptional regulator.
  
     0.773
AIE86082.1
Transcriptional regulator, lacI family.
  
     0.773
AIE86515.1
Transcriptional regulator, LacI family.
  
     0.773
AIE84065.1
Transcriptional regulator, LacI family.
  
     0.772
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.