Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIE85031.1Transcriptional regulator, AraC family protein. (296 aa)    
Predicted Functional Partners:
AIE84381.1
Transcriptional regulator, AraC family.
  
   0.791
AIE83870.1
Transcriptional regulatory protein.
  
   0.662
AIE84376.1
Transcriptional regulator, AraC family.
  
   0.658
AIE85032.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
       0.658
AIE85033.1
Hypothetical protein.
       0.566
AIE85030.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
     
 0.560
AIE86027.1
AraC family transcriptional regulator.
 
 
 0.555
AIE84520.1
Periplasmic binding protein/LacI transcriptional regulator.
  
  
 0.541
AIE85813.1
Regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator.
  
  
 0.541
AIE85683.1
NAD-dependent protein deacetylase of SIR2 family.
 
    0.514
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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