STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85109.1FAD/FMN-dependent dehydrogenase. (305 aa)    
Predicted Functional Partners:
AIE85110.1
Glycolate dehydrogenase.
 
 
 0.993
AIE85106.1
Glycolate oxidase subunit.
 
  
 
0.957
AIE86009.1
D-isomer specific 2-hydroxyacid dehydrogenase.
   
 0.916
AIE85204.1
HAD family hydrolase.
    
 0.904
AIE85723.1
Haloacid dehalogenase.
    
 0.904
AIE87845.1
Electron transfer flavoprotein, alpha subunit.
 
 
 0.518
AIE87844.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.489
AIE85107.1
Hypothetical protein.
       0.459
AIE85108.1
Hypothetical protein.
       0.459
AIE86400.1
Glutamate synthase.
     
 0.436
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.