STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85331.1Luciferase-like protein. (331 aa)    
Predicted Functional Partners:
AIE85332.1
DEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family.
       0.561
AIE83938.1
NADPH-dependent FMN reductase.
  
 
 0.534
AIE84299.1
Outer membrane lipoprotein omp16 precursor.
  
  
 0.510
AIE84339.1
ABC-type probable sulfate transporter, periplasmic binding protein.
  
  
 0.477
AIE84298.1
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit.
  
  
 0.422
AIE84337.1
ABC-type probable sulfate transporter, permease protein.
  
  
 0.422
AIE84297.1
Sulfate-transporting ATPase.
  
  
 0.414
AIE84338.1
Sulfate ABC transporter ATP-binding protein.
  
  
 0.414
AIE84067.1
NADH dehydrogenase.
 
  
 0.401
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.