STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85363.1Extracellular ligand-binding receptor. (403 aa)    
Predicted Functional Partners:
AIE87647.1
Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.988
AIE87648.1
High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.987
AIE87646.1
ABC transporter related protein.
 
 
 0.982
AIE88013.1
ABC transporter-like protein.
 
 
 0.980
AIE86834.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
  
  0.972
AIE84113.1
Extracellular ligand-binding receptor.
  
  
  0.971
AIE87649.1
Extracellular ligand-binding receptor.
  
  
 
0.928
AIE87583.1
Extracellular ligand-binding receptor.
  
  
 
0.925
AIE85359.1
ABC transporter ATP-binding protein.
  
 
 0.917
AIE85362.1
Hypothetical protein.
       0.544
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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