STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85380.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AIE85381.1
Hypothetical protein.
     0.974
AIE85379.1
TPR repeat-containing protein.
 
    0.863
AIE85378.1
Cobalt transport protein CbiM.
  
    0.572
AIE85377.1
ATPase component NikO of energizing module of nickel ECF transporter.
     
 0.565
AIE85376.1
Hypothetical protein.
       0.563
AIE84540.1
Sensory box histidine kinase/response regulator.
  
     0.561
AIE85382.1
Hypothetical protein.
       0.527
AIE85383.1
Hypothetical protein.
       0.464
AIE85311.1
Acetyltransferase, GNAT family.
  
    0.405
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.