STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85427.1alpha-L-fucosidase. (465 aa)    
Predicted Functional Partners:
AIE86113.1
Coagulation factor 5/8 type domain-containing protein.
  
     0.735
AIE84535.1
Glycoside hydrolase family 29 (alpha-L- fucosidase).
  
     0.733
AIE86217.1
Pyruvate carboxyltransferase.
 
      0.608
AIE83675.1
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
  
   
 0.538
AIE85760.1
Coagulation factor 5/8 type domain protein.
 
     0.475
AIE85927.1
alpha-L-fucosidase 1.
  
     0.442
AIE84153.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
   
 0.415
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.