STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85515.1Hypothetical protein. (351 aa)    
Predicted Functional Partners:
AIE85514.1
Rhamnosidase.
       0.550
AIE85516.1
Hypothetical protein.
       0.541
AIE85513.1
Hypothetical protein.
 
     0.475
AIE86849.1
Transcriptional regulator, winged helix family.
  
     0.436
AIE84025.1
Transcriptional activator.
  
     0.428
AIE85791.1
Transcriptional activator.
  
     0.422
AIE86076.1
Transcriptional activator.
  
     0.420
AIE87470.1
Transcriptional activator.
  
     0.418
AIE86155.1
FAD linked oxidase.
  
     0.416
AIE85171.1
Serine/threonine protein kinase.
  
     0.415
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.