STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85696.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
AIE86464.1
TonB-dependent receptor.
    
 
 0.914
AIE87948.1
PA14 domain protein.
  
   
 0.598
AIE86226.1
YVTN beta-propeller repeat-containing protein.
  
     0.596
AIE84273.1
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
  
   0.542
AIE86702.1
Hypothetical protein.
  
     0.531
AIE85697.1
Hypothetical protein.
       0.489
AIE88064.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
   0.481
AIE87256.1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 1 family.
  
   0.463
AIE84281.1
Glycosyl transferase group 1.
  
   
 0.462
AIE87385.1
40-residue YVTN family beta-propeller repeat protein.
  
   
 0.450
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.