STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85857.1Regulatory subunit of cAMP-dependent protein kinase. (152 aa)    
Predicted Functional Partners:
AIE86939.1
Regulatory subunit of cAMP-dependent protein kinase.
  
  
  0.971
AIE84030.1
Cyclic nucleotide-binding protein.
  
  
  0.921
AIE86035.1
Regulatory subunit of cAMP-dependent protein kinase.
  
  
 
0.916
AIE86374.1
Adenylate/guanylate cyclase with Chase sensor.
 
 0.840
AIE88100.1
TIR protein (modular protein).
 
 0.776
AIE83857.1
Hypothetical protein.
 
 0.658
AIE85856.1
Hypothetical protein.
       0.574
AIE86900.1
Putative hybrid histidine kinase.
  
 
 0.484
AIE87165.1
Multi-sensor hybrid histidine kinase.
  
 
 0.477
AIE84807.1
Pup ligase.
  
    0.458
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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