STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85897.1KaiB. (98 aa)    
Predicted Functional Partners:
AIE85898.1
Circadian clock protein KaiC.
 
 
 
 0.960
AIE83841.1
Putative circadian clock protein, KaiC.
 
 
 
 0.889
AIE85834.1
Putative circadian clock protein, KaiC.
 
 
 
 0.872
AIE85896.1
Sensory box histidine kinase.
      0.806
AIE86405.1
Hypothetical protein.
   
 
 0.585
AIE86900.1
Putative hybrid histidine kinase.
   
 
 0.461
AIE86118.1
Hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.458
AIE87165.1
Multi-sensor hybrid histidine kinase.
   
 
 0.450
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.