STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE85947.1Redoxin domain-containing protein. (400 aa)    
Predicted Functional Partners:
AIE88147.1
Cytochrome c-like DipZ protein, thioredoxin.
 
 0.865
AIE85946.1
Hypothetical protein.
       0.773
AIE83463.1
Thiol-disulfide isomerase-like thioredoxin.
  
     0.730
AIE87529.1
Thiol-disulfide isomerase-like thioredoxin.
  
     0.569
AIE86120.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.536
AIE87195.1
Ribonucleotide-diphosphate reductase subunit alpha.
 
 
 0.504
AIE85945.1
Peptidase M1 membrane alanine aminopeptidase.
   
   0.493
AIE87313.1
Cytochrome c heme lyase subunit CcmF.
 
  
 0.490
AIE88098.1
Cytochrome c biogenesis protein transmembrane region.
 
 
 0.468
AIE85556.1
Cytochrome c oxidase subunit II.
   
 
 0.430
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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