STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86023.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
AIE86022.1
Transcriptional regulator, LacI family.
       0.752
AIE85986.1
General secretion pathway protein K.
 
 
 0.718
AIE87570.1
General secretion pathway protein K.
 
 
 0.660
AIE84070.1
Hypothetical protein.
  
    0.658
AIE86757.1
Hypothetical protein.
  
     0.595
AIE83735.1
Hypothetical protein.
  
     0.593
AIE86710.1
Glycosyl transferase family 39.
  
     0.592
AIE87134.1
Hypothetical protein.
  
    0.570
AIE84451.1
Hypothetical protein.
  
     0.555
AIE83410.1
Hypothetical protein.
  
     0.535
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.