STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86228.1Protease; Degrades oligopeptides; Belongs to the peptidase S41B family. (1046 aa)    
Predicted Functional Partners:
AIE86227.1
Hypothetical protein.
       0.723
AIE87551.1
Peptidase S9 prolyl oligopeptidase.
  
     0.671
AIE84035.1
Putative dipeptidyl peptidase.
  
     0.644
AIE87544.1
Putative acylaminoacyl-peptidase.
  
     0.622
AIE85112.1
Dipeptidyl peptidase IV.
  
     0.589
AIE86315.1
Putative dipeptidyl peptidase IV.
  
     0.569
AIE87136.1
Dipeptidyl-peptidase.
  
     0.544
AIE85019.1
Hypothetical protein.
  
     0.540
AIE87552.1
Peptidase S9, prolyl oligopeptidase active site domain protein.
  
    0.537
AIE84209.1
Dipeptidyl peptidase IV.
  
     0.533
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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