STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86439.1Thioredoxin reductase. (314 aa)    
Predicted Functional Partners:
AIE86872.1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.955
AIE83918.1
Cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
  0.916
AIE84489.1
Thioredoxin reductase.
  
  
0.911
AIE85750.1
Selenide, water dikinase.
     
 0.906
AIE87046.1
Cystathionine gamma-lyase.
   
 
 0.904
AIE86438.1
Hypothetical protein.
       0.773
AIE83912.1
Thioredoxin; Belongs to the thioredoxin family.
 
 0.711
AIE88147.1
Cytochrome c-like DipZ protein, thioredoxin.
  
 
 0.600
AIE86440.1
Hypothetical protein.
       0.576
AIE84881.1
UBA/THIF-type NAD/FAD binding protein.
  
  
 0.558
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.