STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86514.1Transcriptional regulator, AraC family. (293 aa)    
Predicted Functional Partners:
AIE85335.1
Transcriptional regulator, AraC family.
  
   0.792
AIE84851.1
AraC family transcriptional regulator.
 
 
 0.788
AIE84758.1
Transcriptional regulator, AraC family.
  
     0.769
AIE84381.1
Transcriptional regulator, AraC family.
  
     0.767
AIE86403.1
Transcriptional regulator, AraC family protein.
  
     0.767
AIE88032.1
AraC family transcriptional regulator.
  
     0.767
AIE83691.1
Transcriptional regulator, AraC family.
 
 
 0.766
AIE84080.1
Helix-turn-helix- domain containing protein, AraC type.
  
     0.766
AIE85013.1
Transcriptional regulator, AraC family.
  
     0.764
AIE85193.1
Transcriptional regulator, AraC family.
  
     0.764
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.