STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86651.1Polysaccharide biosynthesis protein CapD. (643 aa)    
Predicted Functional Partners:
AIE86645.1
DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.956
AIE85217.1
Pleiotropic regulatory protein DegT; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.950
AIE86661.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 0.922
AIE86674.1
Lipopolysaccharide biosynthesis protein.
 
  
 0.894
AIE86673.1
Polysaccharide export protein.
 
  
 0.669
AIE86666.1
Hypothetical protein.
  
  
 0.634
AIE86622.1
Polysaccharide export periplasmic protein.
  
  
 0.620
AIE84798.1
Mannose-1-phosphate guanylyltransferase.
  
  
 0.617
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.606
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.606
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.