STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE86792.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
AIE84070.1
Hypothetical protein.
 
    0.712
AIE85986.1
General secretion pathway protein K.
 
 
 0.666
AIE87570.1
General secretion pathway protein K.
 
 
 0.643
AIE86710.1
Glycosyl transferase family 39.
  
     0.620
AIE83735.1
Hypothetical protein.
  
     0.577
AIE87134.1
Hypothetical protein.
 
    0.560
AIE86370.1
Hypothetical protein.
 
    0.543
AIE83996.1
Hypothetical protein.
 
    0.541
AIE85424.1
Hypothetical protein.
 
    0.528
AIE83410.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.