STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE87514.1Putative xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (342 aa)    
Predicted Functional Partners:
AIE87513.1
Endo-1,4-beta-xylanase D.
     0.994
AIE85692.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.914
AIE83678.1
Xylan 1,4-beta-xylosidase.
     
  0.900
AIE84275.1
Glycoside hydrolase family 43 protein; Belongs to the glycosyl hydrolase 43 family.
     
  0.900
AIE85930.1
Xylosidase b.
     
  0.900
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.812
AIE86015.1
Aldo/keto reductase.
     
  0.800
AIE87515.1
Putative aminopeptidase.
       0.658
AIE86444.1
Hypothetical protein.
  
     0.595
AIE87939.1
Glycosidase related protein.
  
     0.486
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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