STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE87569.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
AIE87570.1
General secretion pathway protein K.
  
 
 0.874
AIE87566.1
General secretion pathway protein G.
  
 
 0.819
AIE87567.1
Hypothetical protein.
       0.773
AIE87568.1
General secretion pathway protein I.
       0.773
AIE87571.1
Hypothetical protein.
       0.675
AIE87572.1
Hypothetical protein.
       0.675
AIE87573.1
Hypothetical protein.
       0.675
AIE87565.1
Type IV pilus assembly protein PilC.
  
  
 0.649
AIE85986.1
General secretion pathway protein K.
  
 
 0.629
AIE87574.1
General secretion pathway protein D.
  
  
 0.601
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.