STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE87574.1General secretion pathway protein D. (806 aa)    
Predicted Functional Partners:
AIE87566.1
General secretion pathway protein G.
 
  
 0.878
AIE87564.1
Type IV fimbrial assembly, ATPase PilB.
 
  
 0.780
AIE87570.1
General secretion pathway protein K.
 
   
 0.760
AIE83874.1
General secretion pathway protein G.
 
  
 0.748
AIE87565.1
Type IV pilus assembly protein PilC.
 
  
 0.741
AIE86461.1
MotA/TolQ/ExbB proton channel.
  
    0.726
AIE86858.1
Type IV-A pilus assembly ATPase PilB.
 
  
 0.712
AIE85175.1
Surface antigen (D15).
  
   
 0.711
AIE85981.1
Type IV fimbrial assembly, ATPase PilB.
 
  
 0.710
AIE86462.1
Biopolymer transport protein ExbD/TolR.
  
     0.658
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.