STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE87742.1Teichoic acid export ATP-binding protein TagH. (250 aa)    
Predicted Functional Partners:
AIE87743.1
Polysaccharide ABC transporter, permease component.
 
 0.999
AIE86622.1
Polysaccharide export periplasmic protein.
  
  
 0.683
AIE86673.1
Polysaccharide export protein.
  
  
 0.683
AIE86736.1
Phosphoribosyltransferase.
   
    0.569
AIE86958.1
Putative glycosyl transferase.
 
  
 0.548
AIE86957.1
Glycosyl transferase family protein.
 
  
 0.528
AIE87247.1
Glycosyl transferase family 2.
 
  
 0.460
AIE86760.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
    0.438
AIE87744.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
       0.436
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.432
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.