STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE87942.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
AIE87943.1
Amino acid transporter.
       0.636
AIE87264.1
60 kDa SS-A/Ro ribonucleoprotein.
  
     0.608
AIE83833.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
     0.590
AIE86539.1
Nad(p)h dehydrogenase (quinone).
  
     0.576
AIE85544.1
Interphotoreceptor retinoid-binding protein.
  
     0.570
AIE87941.1
Hypothetical protein.
       0.545
AIE84550.1
Indoleamine 2,3-dioxygenase.
  
     0.520
AIE88001.1
N-acetyltransferase.
  
     0.487
AIE84815.1
Fibronectin type III domain protein.
  
     0.450
AIE83929.1
Hypothetical protein.
  
     0.443
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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