STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE88024.1Response regulator. (347 aa)    
Predicted Functional Partners:
AIE87987.1
Diguanylate cyclase.
 
 0.970
AIE84919.1
Signal transduction response regulator.
 
  
 0.892
AIE87386.1
Diguanylate cyclase.
 
 0.879
AIE86924.1
Response regulator receiver modulated diguanylate cyclase.
  
 0.864
AIE86069.1
Diguanylate cyclase/phosphodiesterase.
 
 0.806
AIE88025.1
Multi-sensor hybrid histidine kinase.
 
 
 
 0.783
AIE86401.1
Signal transduction protein.
 
  
 0.763
AIE84218.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.658
AIE86900.1
Putative hybrid histidine kinase.
 
 0.639
AIE87165.1
Multi-sensor hybrid histidine kinase.
 
 
 0.630
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.