STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE88098.1Cytochrome c biogenesis protein transmembrane region. (591 aa)    
Predicted Functional Partners:
AIE84683.1
Thiol-disulfide interchange protein DsbD.
      0.889
AIE88099.1
4-hydroxyphenylpyruvate dioxygenase.
       0.475
AIE85947.1
Redoxin domain-containing protein.
 
 
 0.468
AIE84786.1
Thioredoxin related protein.
 
 
 0.466
AIE83744.1
Putative thioredoxin.
 
 
 0.445
AIE83463.1
Thiol-disulfide isomerase-like thioredoxin.
 
 
 0.442
AIE83639.1
Thioredoxin family protein.
 
 
 0.439
AIE84092.1
Thioredoxin family protein.
 
   
 0.421
AIE86359.1
Thiol-disulfide isomerase-like thioredoxin.
 
 
 0.401
Your Current Organism:
Fimbriimonas ginsengisoli
NCBI taxonomy Id: 661478
Other names: F. ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli Gsoil 348, Fimbriimonas ginsengisoli str. Gsoil 348, Fimbriimonas ginsengisoli strain Gsoil 348, candidate division OP10 bacterium Gsoil 348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.