STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC05508.1DinB superfamily protein. (191 aa)    
Predicted Functional Partners:
SFC05458.1
Maltose phosphorylase.
       0.725
SFC19650.1
Starch-binding associating with outer membrane.
  
     0.611
SFC30223.1
(S)-ureidoglycine aminohydrolase.
  
     0.590
SFD78752.1
Uncharacterized conserved protein, DUF305 family.
  
     0.574
SFE71898.1
Hypothetical protein.
  
     0.554
SFB91267.1
Hypothetical protein.
  
     0.553
SFC05604.1
Molybdenum cofactor cytidylyltransferase.
       0.549
SFC05401.1
Hypothetical protein.
       0.502
SFC05306.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
     0.501
SFD67986.1
Putative endonuclease.
  
     0.501
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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