STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC22060.1Signal transduction histidine kinase. (454 aa)    
Predicted Functional Partners:
SFC31455.1
PAS domain S-box-containing protein.
 
0.970
SFF33391.1
Signal transduction histidine kinase.
 
0.970
SFC86380.1
Hpt domain-containing protein.
 
0.968
SFD12423.1
PAS fold-containing protein.
 
0.968
SFD13720.1
PAS domain S-box-containing protein.
  
0.966
SFC21998.1
Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR.
 
  0.962
SFD32457.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.952
SFC69183.1
Two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR.
  
  0.936
SFD65785.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
0.922
SFC21023.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.913
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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