STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC78902.1Por secretion system C-terminal sorting domain-containing protein. (747 aa)    
Predicted Functional Partners:
SFD32052.1
CarboxypepD_reg-like domain-containing protein.
  
     0.725
SFD32750.1
Hypothetical protein.
  
    0.721
SFD29191.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.678
SFD97613.1
Hypothetical protein.
  
     0.669
SFD32406.1
Hypothetical protein.
  
     0.656
SFE39130.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.652
SFC14626.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.647
SFD68577.1
Hypothetical protein.
  
    0.643
SFC87166.1
Hypothetical protein.
  
     0.604
SFB94856.1
Hypothetical protein.
  
     0.586
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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