STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC80663.1Hypothetical protein. (474 aa)    
Predicted Functional Partners:
SFC24648.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
   
  0.707
SFE36829.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.701
SFC91864.1
Hypothetical protein.
  
     0.682
SFE48138.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.680
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.675
SFD94541.1
Hypothetical protein.
  
     0.673
SFC84311.1
Tetratricopeptide repeat-containing protein.
  
     0.670
SFE00619.1
Gliding motility-associated C-terminal domain-containing protein.
  
    0.665
SFC16988.1
Hypothetical protein.
  
     0.664
SFD10255.1
Intein N-terminal splicing region.
  
     0.646
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.